High prevalence of hepatitis A and E viruses in environmental and clinical samples from West ArgentinaArticle Published on 2023-03-012023-05-31 Journal: The Brazilian journal of infectious diseases : an [Category] A형 간염, E형 간염, Fulltext, [키워드] clinical samples genetic diversity HAV HEV Sewage. [DOI] 10.1016/j.bjid.2022.102738 PMC 바로가기
The polymorphic analysis of cox1 and cob genes of Echinococcus granulosus in the Ngari region of Tibet in ChinaArticle Published on 2023-03-012023-06-22 Journal: Acta tropica [Category] 조류인플루엔자, [키워드] E. granulosus genetic diversity Genotype Haplotype mitochondrial DNA. [DOI] 10.1016/j.actatropica.2022.106803 PMC 바로가기
Introductions of Human-Origin Seasonal H3N2, H1N2 and Pre-2009 H1N1 Influenza Viruses to Swine in BrazilArticle Published on 2023-02-192023-06-23 Journal: Viruses [Category] 신종인플루엔자, [키워드] genetic diversity influenza A virus Reassortment spillover Surveillance swine. [DOI] 10.3390/v15020576 PMC 바로가기
Temporal dynamics of SARS-CoV-2 genome and detection of variants of concern in wastewater influent from two metropolitan areas in ArkansasArticle Published on 2022-11-252022-11-15 Journal: The Science of the total environment [Category] COVID19(2023년), SARS, 변종, 치료기술, 치료제, [키워드] Affect approach Arkansas association Asymptomatic changes in Community complementary contribute coronavirus COVID-19 COVID-19 case COVID-19 testing death detect diagnostic Factors fecal genetic diversity Genetic variant genomic change highlight identity infected individual investigated nucleocapsid ORF1ab polymerase chain polyprotein public health quantified Quantitative recorded RNA sequencing RT-qPCR RT-qPCR assay SARS-CoV-2 SARS-CoV-2 genome SARS-CoV-2 mutations SARS-CoV-2 RNA SARS-CoV-2 variant sensitivity silent Support Surface glycoprotein Surveillance TaqMan assay target Temporal the disease transmission of SARS-CoV-2 variants variants of concern viral gene viral titer virus virus genome was used wastewater Wastewater. [DOI] 10.1016/j.scitotenv.2022.157546 PMC 바로가기
Genomic surveillance: Circulating lineages and genomic variation of SARS-CoV-2 in early pandemic in Ceará state, Northeast BrazilArticle Published on 2022-11-012022-11-16 Journal: Virus research [Category] SARS, 변종, 유전자 메커니즘, 치료기술, [키워드] B.1 B.1.1 B.1.1.28 B.1.1.33 Brazil circulating compose COVID-19 dataset death rate genetic diversity Genome Genome sequences genomes sequenced genomic genomic variation GISAID database impacted Lineage Missense Missense mutations Mutation mutations mutations. Other lineage P.1 P.2 pandemic polymorphism prevalent prevalent lineage SARS-CoV-2 SARS-CoV-2 sequencing sequence sequenced single-nucleotide SNPs Surveillance synonymous virus [DOI] 10.1016/j.virusres.2022.198908 PMC 바로가기
Detection and prevalence of SARS-CoV-2 co-infections during the Omicron variant circulation in FranceArticle Published on 2022-10-232022-11-15 Journal: Nature Communications [Category] COVID19(2023년), SARS, 변종, 치료기술, [키워드] Admission bioinformatics circulation clinical impact Co-infection collected Delta detect detection evaluate evaluated France genetic diversity genomic hospitalized patients ICU intensive care isolate Lineage lineages omicron Patient patients Prevalence question raised random recombinants reported risk SARS-CoV-2 SARS-CoV-2 variant sets of primer Surveillance variant whole-genome sequencing [DOI] 10.1038/s41467-022-33910-9 PMC 바로가기
Evolutionary Pattern Comparisons of the SARS-CoV-2 Delta Variant in Countries/Regions with High and Low Vaccine CoverageArticle Published on 2022-10-192022-11-15 Journal: Viruses [Category] COVID19(2023년), SARS, 변종, 치료기술, [키워드] accelerate caused Cluster co-mutation Coverage COVID-19 vaccine Delta delta variant dominant exhibited FIVE Frequency G142D Genetic genetic divergence genetic diversity Host immune immune evasion immune pressure Infection less Methylation Mutation ORF7a pattern Positive selection proportion SARS-CoV-2 sequence suggested the S protein the SARS-CoV-2 unique Vaccine vaccine coverage. variant Variation [DOI] 10.3390/v14102296 PMC 바로가기
Genetic diversity and evolutionary convergence of cryptic SARS- CoV-2 lineages detected via wastewater sequencingArticle Published on 2022-10-142022-11-15 Journal: PLoS Pathogens [Category] COVID19(2023년), SARS, 변종, 진단, 치료기술, 치료제, [키워드] Alpha VOC amino acid substitution amplify approach Course effective Epidemiology genetic diversity greater increasingly Infection Lineage lineages majority mutated New York City occurred omicron over Patient RBD Receptor binding domain reservoirs residue resolved SARS- CoV-2 SARS-CoV-2 SARS-CoV-2 surveillance sequence Sequencing Spread substitutions the RBD USA variant viral lineage VoC wastewater while [DOI] 10.1371/journal.ppat.1010636 PMC 바로가기
Host genetic diversity and genetic variations of SARS-CoV-2 in COVID-19 pathogenesis and the effectiveness of vaccinationReview article Published on 2022-10-012022-10-05 Journal: International immunopharmacology [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, [키워드] ACE2 acute respiratory syndrome Affect Asymptomatic clinical manifestation coronavirus disease Coronavirus-2 COVID-19 COVID-19 pathogenesis demonstrated Effectiveness ENhance Epigenetic Genes Genetic genetic diversity Genetic variation Genome heterogeneity Host host cell Immune escape immune-related genes life-threatening Mutation outbreak provide responsible SARS-CoV-2 severity of COVID-19 shown Symptoms vaccination Vaccine variant variants virus [DOI] 10.1016/j.intimp.2022.109128 [Article Type] Review article
Genome sequencing and analysis of genomic diversity in the locally transmitted SARS-CoV-2 in PakistanArticle Published on 2022-09-012022-11-15 Journal: Transboundary and emerging diseases [Category] COVID19(2023년), SARS, 변종, 유전자 메커니즘, 진단, 치료기술, [키워드] Alpha variant Analysis analyzed B.1.1.7 B.1.617.2 collected common strain country Course COVID-19 COVID-19 pandemic COVID-19 patient Delta detect evaluated event Evolution of SARS-CoV-2 First wave Frequency Genetic genetic diversity Genetic evolution Genome genomic in silico Infection Lineage Local Mutation pandemic Phylogenetic analysis preventive measures provided SARS-CoV-2 SARS-CoV-2 lineages second wave Sequencing spatiotemporal spatiotemporal surveillance strain Strains survival the SARS-CoV-2 the SARS-CoV-2 genome Transmission transmitted variant variants of concern viral strain Viral variants Viral variants. virus whole genome [DOI] 10.1111/tbed.14586 PMC 바로가기